Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm5264-201ENSMUST00000190584 848 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Gm43575-201ENSMUST00000196420 516 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Gm6376-201ENSMUST00000209407 580 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Gm5364-201ENSMUST00000216789 889 ntBASIC16.12■□□□□ 0.17
Sox18P43680 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.12■□□□□ 0.17
Sox18P43680 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.11■□□□□ 0.17
Sox18P43680 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.11■□□□□ 0.17
Sox18P43680 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Sox18P43680 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.11■□□□□ 0.17
Sox18P43680 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sox18P43680 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sox18P43680 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox18P43680 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.1■□□□□ 0.17
Sox18P43680 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.1■□□□□ 0.17
Sox18P43680 Gm11779-201ENSMUST00000118541 368 ntBASIC16.1■□□□□ 0.17
Sox18P43680 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Sox18P43680 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.1■□□□□ 0.17
Sox18P43680 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sox18P43680 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox18P43680 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.09■□□□□ 0.17
Sox18P43680 Gm12350-201ENSMUST00000121208 462 ntBASIC16.09■□□□□ 0.17
Sox18P43680 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.09■□□□□ 0.17
Sox18P43680 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.09■□□□□ 0.17
Sox18P43680 Gm6296-201ENSMUST00000222599 943 ntBASIC16.09■□□□□ 0.17
Sox18P43680 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.09■□□□□ 0.17
Sox18P43680 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sox18P43680 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Sox18P43680 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox18P43680 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sox18P43680 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.09■□□□□ 0.17
Sox18P43680 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox18P43680 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.08■□□□□ 0.17
Sox18P43680 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Sox18P43680 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sox18P43680 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.08■□□□□ 0.17
Sox18P43680 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.08■□□□□ 0.16
Sox18P43680 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.08■□□□□ 0.16
Sox18P43680 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.08■□□□□ 0.16
Sox18P43680 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms