Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Gm15039-201ENSMUST00000118914 875 ntBASIC18.44■□□□□ 0.54
Sox5P35710 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Sox5P35710 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.44■□□□□ 0.54
Sox5P35710 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sox5P35710 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Sox5P35710 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sox5P35710 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox5P35710 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.44■□□□□ 0.54
Sox5P35710 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sox5P35710 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sox5P35710 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Sox5P35710 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox5P35710 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.43■□□□□ 0.54
Sox5P35710 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox5P35710 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sox5P35710 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.42■□□□□ 0.54
Sox5P35710 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox5P35710 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Sox5P35710 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Gm18666-201ENSMUST00000190039 958 ntBASIC18.42■□□□□ 0.54
Sox5P35710 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox5P35710 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sox5P35710 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox5P35710 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.41■□□□□ 0.54
Sox5P35710 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox5P35710 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox5P35710 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox5P35710 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.41■□□□□ 0.54
Sox5P35710 Gm37025-201ENSMUST00000195159 829 ntBASIC18.41■□□□□ 0.54
Sox5P35710 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox5P35710 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sox5P35710 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox5P35710 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
Sox5P35710 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Sox5P35710 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox5P35710 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sox5P35710 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sox5P35710 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox5P35710 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.39■□□□□ 0.53
Sox5P35710 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sox5P35710 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox5P35710 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms