Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.81□□□□□ -0.2
Rab5cP35278 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Rab5cP35278 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.81□□□□□ -0.2
Rab5cP35278 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.81□□□□□ -0.2
Rab5cP35278 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rab5cP35278 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rab5cP35278 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab5cP35278 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.81□□□□□ -0.2
Rab5cP35278 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rab5cP35278 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.8□□□□□ -0.2
Rab5cP35278 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rab5cP35278 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.8□□□□□ -0.2
Rab5cP35278 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
Rab5cP35278 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.8□□□□□ -0.2
Rab5cP35278 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rab5cP35278 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab5cP35278 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.79□□□□□ -0.2
Rab5cP35278 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rab5cP35278 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.79□□□□□ -0.2
Rab5cP35278 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rab5cP35278 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rab5cP35278 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.79□□□□□ -0.2
Rab5cP35278 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.79□□□□□ -0.2
Rab5cP35278 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.79□□□□□ -0.2
Rab5cP35278 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.79□□□□□ -0.2
Rab5cP35278 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab5cP35278 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rab5cP35278 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.78□□□□□ -0.2
Rab5cP35278 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.78□□□□□ -0.2
Rab5cP35278 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.78□□□□□ -0.2
Rab5cP35278 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab5cP35278 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab5cP35278 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms