Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rom1P32958 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Rom1P32958 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rom1P32958 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.38□□□□□ -0.27
Rom1P32958 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.38□□□□□ -0.27
Rom1P32958 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rom1P32958 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.38□□□□□ -0.27
Rom1P32958 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.38□□□□□ -0.27
Rom1P32958 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rom1P32958 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.37□□□□□ -0.27
Rom1P32958 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rom1P32958 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.37□□□□□ -0.27
Rom1P32958 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rom1P32958 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rom1P32958 Mir6349-201ENSMUST00000184059 97 ntBASIC13.37□□□□□ -0.27
Rom1P32958 Gm7514-201ENSMUST00000209475 934 ntBASIC13.37□□□□□ -0.27
Rom1P32958 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.37□□□□□ -0.27
Rom1P32958 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rom1P32958 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rom1P32958 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rom1P32958 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rom1P32958 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Rom1P32958 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rom1P32958 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rom1P32958 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Rom1P32958 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.36□□□□□ -0.27
Rom1P32958 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rom1P32958 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.36□□□□□ -0.27
Rom1P32958 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rom1P32958 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Rom1P32958 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rom1P32958 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.35□□□□□ -0.27
Rom1P32958 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rom1P32958 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rom1P32958 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms