Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pde6aP27664 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pde6aP27664 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pde6aP27664 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.55■□□□□ 0.72
Pde6aP27664 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pde6aP27664 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.55■□□□□ 0.72
Pde6aP27664 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.55■□□□□ 0.72
Pde6aP27664 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Pde6aP27664 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pde6aP27664 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pde6aP27664 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.55■□□□□ 0.72
Pde6aP27664 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pde6aP27664 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pde6aP27664 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6aP27664 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pde6aP27664 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6aP27664 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Pde6aP27664 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Gm10013-201ENSMUST00000106074 672 ntBASIC19.53■□□□□ 0.72
Pde6aP27664 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Pde6aP27664 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pde6aP27664 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.53■□□□□ 0.72
Pde6aP27664 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6aP27664 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.52■□□□□ 0.72
Pde6aP27664 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pde6aP27664 Gm27389-201ENSMUST00000183622 195 ntBASIC19.52■□□□□ 0.72
Pde6aP27664 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.52■□□□□ 0.72
Pde6aP27664 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6aP27664 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pde6aP27664 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6aP27664 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6aP27664 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6aP27664 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6aP27664 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pde6aP27664 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.51■□□□□ 0.71
Pde6aP27664 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Pde6aP27664 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.51■□□□□ 0.71
Pde6aP27664 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.51■□□□□ 0.71
Pde6aP27664 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pde6aP27664 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.51■□□□□ 0.71
Pde6aP27664 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.51■□□□□ 0.71
Pde6aP27664 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pde6aP27664 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.51■□□□□ 0.71
Pde6aP27664 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6aP27664 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms