Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.09□□□□□ -0.15
Col8a2P25318 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col8a2P25318 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col8a2P25318 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col8a2P25318 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col8a2P25318 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col8a2P25318 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Col8a2P25318 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a2P25318 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col8a2P25318 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a2P25318 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a2P25318 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.08□□□□□ -0.16
Col8a2P25318 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a2P25318 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.08□□□□□ -0.16
Col8a2P25318 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.08□□□□□ -0.16
Col8a2P25318 Gm29518-201ENSMUST00000190858 372 ntBASIC14.08□□□□□ -0.16
Col8a2P25318 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a2P25318 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a2P25318 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col8a2P25318 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col8a2P25318 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col8a2P25318 Gm37722-201ENSMUST00000193757 208 ntBASIC14.07□□□□□ -0.16
Col8a2P25318 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a2P25318 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col8a2P25318 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col8a2P25318 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.07□□□□□ -0.16
Col8a2P25318 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a2P25318 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col8a2P25318 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Mir770-201ENSMUST00000103252 94 ntBASIC14.06□□□□□ -0.16
Col8a2P25318 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a2P25318 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.06□□□□□ -0.16
Col8a2P25318 Gm17808-201ENSMUST00000200859 894 ntBASIC14.06□□□□□ -0.16
Col8a2P25318 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col8a2P25318 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a2P25318 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Col8a2P25318 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col8a2P25318 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Col8a2P25318 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col8a2P25318 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col8a2P25318 Gm7284-201ENSMUST00000131667 944 ntBASIC14.05□□□□□ -0.16
Col8a2P25318 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col8a2P25318 Gm33142-201ENSMUST00000193913 867 ntBASIC14.05□□□□□ -0.16
Col8a2P25318 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Col8a2P25318 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col8a2P25318 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms