Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdx1P18111 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdx1P18111 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx1P18111 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.63□□□□□ -0.23
Cdx1P18111 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdx1P18111 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.62□□□□□ -0.23
Cdx1P18111 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cdx1P18111 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdx1P18111 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdx1P18111 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Gm37856-201ENSMUST00000191634 999 ntBASIC13.62□□□□□ -0.23
Cdx1P18111 Gm26524-201ENSMUST00000192339 390 ntBASIC13.62□□□□□ -0.23
Cdx1P18111 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx1P18111 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx1P18111 Rab3c-203ENSMUST00000224180 967 ntBASIC13.62□□□□□ -0.23
Cdx1P18111 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.62□□□□□ -0.23
Cdx1P18111 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx1P18111 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cdx1P18111 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx1P18111 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdx1P18111 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx1P18111 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx1P18111 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx1P18111 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Cdx1P18111 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.61□□□□□ -0.23
Cdx1P18111 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cdx1P18111 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx1P18111 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdx1P18111 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.6□□□□□ -0.23
Cdx1P18111 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdx1P18111 Trmt13-210ENSMUST00000198454 880 ntBASIC13.6□□□□□ -0.23
Cdx1P18111 Gm10252-201ENSMUST00000209541 832 ntBASIC13.6□□□□□ -0.23
Cdx1P18111 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Gm10812-201ENSMUST00000099864 546 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms