Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PdgfrbP05622 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.03■□□□□ 0.32
PdgfrbP05622 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.03■□□□□ 0.32
PdgfrbP05622 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PdgfrbP05622 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PdgfrbP05622 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PdgfrbP05622 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.03■□□□□ 0.32
PdgfrbP05622 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfrbP05622 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Mir6982-201ENSMUST00000184354 68 ntBASIC17.02■□□□□ 0.32
PdgfrbP05622 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.02■□□□□ 0.32
PdgfrbP05622 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfrbP05622 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfrbP05622 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfrbP05622 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfrbP05622 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PdgfrbP05622 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PdgfrbP05622 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfrbP05622 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PdgfrbP05622 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PdgfrbP05622 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PdgfrbP05622 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PdgfrbP05622 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17■□□□□ 0.31
PdgfrbP05622 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PdgfrbP05622 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17■□□□□ 0.31
PdgfrbP05622 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfrbP05622 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PdgfrbP05622 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Gm15565-201ENSMUST00000118890 427 ntBASIC16.99■□□□□ 0.31
PdgfrbP05622 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PdgfrbP05622 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.99■□□□□ 0.31
PdgfrbP05622 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PdgfrbP05622 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PdgfrbP05622 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfrbP05622 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PdgfrbP05622 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms