Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.65■□□□□ 0.42
P04214 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.65■□□□□ 0.42
P04214 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.65■□□□□ 0.42
P04214 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.65■□□□□ 0.42
P04214 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
P04214 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.64■□□□□ 0.42
P04214 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.64■□□□□ 0.41
P04214 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Gm25990-201ENSMUST00000102440 86 ntBASIC17.64■□□□□ 0.41
P04214 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04214 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
P04214 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.64■□□□□ 0.41
P04214 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.64■□□□□ 0.41
P04214 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.64■□□□□ 0.41
P04214 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
P04214 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
P04214 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
P04214 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
P04214 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04214 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.63■□□□□ 0.41
P04214 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Gm7230-201ENSMUST00000173026 815 ntBASIC17.63■□□□□ 0.41
P04214 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04214 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
P04214 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
P04214 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
P04214 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.62■□□□□ 0.41
P04214 Gm13418-201ENSMUST00000119097 944 ntBASIC17.62■□□□□ 0.41
P04214 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.62■□□□□ 0.41
P04214 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.62■□□□□ 0.41
P04214 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.62■□□□□ 0.41
P04214 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.62■□□□□ 0.41
P04214 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
P04214 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
P04214 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04214 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.62■□□□□ 0.41
P04214 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
P04214 Gm6736-201ENSMUST00000166583 948 ntBASIC17.61■□□□□ 0.41
P04214 Gm4535-201ENSMUST00000182274 558 ntBASIC17.61■□□□□ 0.41
P04214 Gm43575-201ENSMUST00000196420 516 ntBASIC17.61■□□□□ 0.41
P04214 Gm7506-201ENSMUST00000207758 815 ntBASIC17.61■□□□□ 0.41
P04214 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.61■□□□□ 0.41
P04214 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.61■□□□□ 0.41
P04214 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Gm10355-201ENSMUST00000097146 517 ntBASIC17.61■□□□□ 0.41
P04214 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.61■□□□□ 0.41
P04214 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.61■□□□□ 0.41
P04214 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.61■□□□□ 0.41
P04214 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04214 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.6■□□□□ 0.41
P04214 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P04214 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms