Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.71■□□□□ 0.91
Col4a1P02463 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col4a1P02463 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col4a1P02463 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a1P02463 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.7■□□□□ 0.91
Col4a1P02463 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.7■□□□□ 0.91
Col4a1P02463 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.7■□□□□ 0.91
Col4a1P02463 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a1P02463 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.7■□□□□ 0.9
Col4a1P02463 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.7■□□□□ 0.9
Col4a1P02463 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.7■□□□□ 0.9
Col4a1P02463 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.7■□□□□ 0.9
Col4a1P02463 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.7■□□□□ 0.9
Col4a1P02463 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.7■□□□□ 0.9
Col4a1P02463 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a1P02463 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.7■□□□□ 0.9
Col4a1P02463 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.69■□□□□ 0.9
Col4a1P02463 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Col4a1P02463 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.69■□□□□ 0.9
Col4a1P02463 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.69■□□□□ 0.9
Col4a1P02463 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Gm7506-201ENSMUST00000207758 815 ntBASIC20.69■□□□□ 0.9
Col4a1P02463 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.69■□□□□ 0.9
Col4a1P02463 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a1P02463 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col4a1P02463 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.68■□□□□ 0.9
Col4a1P02463 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.68■□□□□ 0.9
Col4a1P02463 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.68■□□□□ 0.9
Col4a1P02463 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.68■□□□□ 0.9
Col4a1P02463 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col4a1P02463 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.68■□□□□ 0.9
Col4a1P02463 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Col4a1P02463 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Col4a1P02463 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a1P02463 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Col4a1P02463 Gm4995-201ENSMUST00000117247 432 ntBASIC20.67■□□□□ 0.9
Col4a1P02463 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.67■□□□□ 0.9
Col4a1P02463 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.67■□□□□ 0.9
Col4a1P02463 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.67■□□□□ 0.9
Col4a1P02463 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col4a1P02463 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col4a1P02463 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col4a1P02463 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.67■□□□□ 0.9
Col4a1P02463 Mir5126-201ENSMUST00000175513 77 ntBASIC20.67■□□□□ 0.9
Col4a1P02463 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col4a1P02463 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a1P02463 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.67■□□□□ 0.9
Col4a1P02463 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.66■□□□□ 0.9
Col4a1P02463 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col4a1P02463 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Col4a1P02463 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Gm12350-201ENSMUST00000121208 462 ntBASIC20.66■□□□□ 0.9
Col4a1P02463 Gm7862-201ENSMUST00000121461 292 ntBASIC20.66■□□□□ 0.9
Col4a1P02463 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.66■□□□□ 0.9
Col4a1P02463 Gm18206-201ENSMUST00000207027 926 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms