Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.44■□□□□ 0.38
CopeO89079 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CopeO89079 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CopeO89079 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Gm8495-201ENSMUST00000188740 694 ntBASIC17.43■□□□□ 0.38
CopeO89079 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.43■□□□□ 0.38
CopeO89079 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.43■□□□□ 0.38
CopeO89079 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.43■□□□□ 0.38
CopeO89079 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CopeO89079 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CopeO89079 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CopeO89079 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.42■□□□□ 0.38
CopeO89079 Gm4974-201ENSMUST00000209974 875 ntBASIC17.42■□□□□ 0.38
CopeO89079 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.42■□□□□ 0.38
CopeO89079 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.42■□□□□ 0.38
CopeO89079 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CopeO89079 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CopeO89079 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CopeO89079 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Gm11249-201ENSMUST00000117071 859 ntBASIC17.41■□□□□ 0.38
CopeO89079 Gm12896-201ENSMUST00000118430 226 ntBASIC17.41■□□□□ 0.38
CopeO89079 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CopeO89079 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CopeO89079 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.4■□□□□ 0.38
CopeO89079 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.4■□□□□ 0.38
CopeO89079 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.4■□□□□ 0.38
CopeO89079 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.4■□□□□ 0.38
CopeO89079 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.4■□□□□ 0.38
CopeO89079 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CopeO89079 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CopeO89079 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CopeO89079 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.39■□□□□ 0.38
CopeO89079 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CopeO89079 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms