Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm7791-201ENSMUST00000219066 539 ntBASIC18.66■□□□□ 0.58
IkbkbO88351 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.66■□□□□ 0.58
IkbkbO88351 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
IkbkbO88351 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.65■□□□□ 0.58
IkbkbO88351 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
IkbkbO88351 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.65■□□□□ 0.58
IkbkbO88351 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.65■□□□□ 0.58
IkbkbO88351 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
IkbkbO88351 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IkbkbO88351 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IkbkbO88351 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
IkbkbO88351 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
IkbkbO88351 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
IkbkbO88351 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IkbkbO88351 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Gm2274-201ENSMUST00000184539 609 ntBASIC18.64■□□□□ 0.57
IkbkbO88351 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
IkbkbO88351 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
IkbkbO88351 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
IkbkbO88351 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IkbkbO88351 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.63■□□□□ 0.57
IkbkbO88351 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.63■□□□□ 0.57
IkbkbO88351 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.63■□□□□ 0.57
IkbkbO88351 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
IkbkbO88351 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
IkbkbO88351 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IkbkbO88351 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
IkbkbO88351 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
IkbkbO88351 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.62■□□□□ 0.57
IkbkbO88351 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IkbkbO88351 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Gm37025-201ENSMUST00000195159 829 ntBASIC18.62■□□□□ 0.57
IkbkbO88351 Gm45058-201ENSMUST00000205810 766 ntBASIC18.62■□□□□ 0.57
IkbkbO88351 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IkbkbO88351 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IkbkbO88351 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
IkbkbO88351 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IkbkbO88351 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.6■□□□□ 0.57
IkbkbO88351 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IkbkbO88351 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IkbkbO88351 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms