Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cfdp1O88271 Gm13186-201ENSMUST00000118031 316 ntBASIC21.03■□□□□ 0.96
Cfdp1O88271 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Gm33142-201ENSMUST00000193913 867 ntBASIC21.03■□□□□ 0.96
Cfdp1O88271 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cfdp1O88271 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Gm7367-201ENSMUST00000057611 492 ntBASIC21.03■□□□□ 0.96
Cfdp1O88271 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cfdp1O88271 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cfdp1O88271 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.02■□□□□ 0.96
Cfdp1O88271 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.02■□□□□ 0.96
Cfdp1O88271 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cfdp1O88271 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cfdp1O88271 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfdp1O88271 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cfdp1O88271 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cfdp1O88271 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cfdp1O88271 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Gm29518-201ENSMUST00000190858 372 ntBASIC21.01■□□□□ 0.95
Cfdp1O88271 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfdp1O88271 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.01■□□□□ 0.95
Cfdp1O88271 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21■□□□□ 0.95
Cfdp1O88271 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfdp1O88271 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfdp1O88271 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfdp1O88271 AC122351.1-201ENSMUST00000220467 126 ntBASIC21■□□□□ 0.95
Cfdp1O88271 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cfdp1O88271 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfdp1O88271 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Cfdp1O88271 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.99■□□□□ 0.95
Cfdp1O88271 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.99■□□□□ 0.95
Cfdp1O88271 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cfdp1O88271 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.99■□□□□ 0.95
Cfdp1O88271 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.99■□□□□ 0.95
Cfdp1O88271 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfdp1O88271 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfdp1O88271 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfdp1O88271 Gm11336-201ENSMUST00000118168 334 ntBASIC20.98■□□□□ 0.95
Cfdp1O88271 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfdp1O88271 Gm17808-201ENSMUST00000200859 894 ntBASIC20.98■□□□□ 0.95
Cfdp1O88271 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cfdp1O88271 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfdp1O88271 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms