Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Gfi1bO70237 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Gfi1bO70237 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gfi1bO70237 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.12□□□□□ -0.15
Gfi1bO70237 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.12□□□□□ -0.15
Gfi1bO70237 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gfi1bO70237 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Gfi1bO70237 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.12□□□□□ -0.15
Gfi1bO70237 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfi1bO70237 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Gfi1bO70237 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.11□□□□□ -0.15
Gfi1bO70237 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gfi1bO70237 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gfi1bO70237 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gfi1bO70237 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gfi1bO70237 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfi1bO70237 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.1□□□□□ -0.15
Gfi1bO70237 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.1□□□□□ -0.15
Gfi1bO70237 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Gfi1bO70237 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.1□□□□□ -0.15
Gfi1bO70237 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gfi1bO70237 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.1□□□□□ -0.15
Gfi1bO70237 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1bO70237 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gfi1bO70237 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Gfi1bO70237 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gfi1bO70237 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.09□□□□□ -0.15
Gfi1bO70237 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.09□□□□□ -0.15
Gfi1bO70237 Gm5408-201ENSMUST00000197998 747 ntBASIC14.09□□□□□ -0.15
Gfi1bO70237 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.09□□□□□ -0.15
Gfi1bO70237 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
Gfi1bO70237 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1bO70237 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms