Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Gm37856-201ENSMUST00000191634 999 ntBASIC15.33■□□□□ 0.04
Alx3O70137 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Alx3O70137 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Alx3O70137 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.33■□□□□ 0.04
Alx3O70137 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx3O70137 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Alx3O70137 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx3O70137 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Alx3O70137 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Alx3O70137 Gm12527-201ENSMUST00000117967 564 ntBASIC15.32■□□□□ 0.04
Alx3O70137 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx3O70137 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Alx3O70137 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Alx3O70137 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Alx3O70137 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx3O70137 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Alx3O70137 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Alx3O70137 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Alx3O70137 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
Alx3O70137 Gm12382-201ENSMUST00000122005 922 ntBASIC15.31■□□□□ 0.04
Alx3O70137 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.31■□□□□ 0.04
Alx3O70137 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.31■□□□□ 0.04
Alx3O70137 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.31■□□□□ 0.04
Alx3O70137 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Alx3O70137 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx3O70137 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.3■□□□□ 0.04
Alx3O70137 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.3■□□□□ 0.04
Alx3O70137 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Gm5643-201ENSMUST00000117081 966 ntBASIC15.3■□□□□ 0.04
Alx3O70137 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Alx3O70137 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.3■□□□□ 0.04
Alx3O70137 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.3■□□□□ 0.04
Alx3O70137 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.3■□□□□ 0.04
Alx3O70137 Trmt13-210ENSMUST00000198454 880 ntBASIC15.3■□□□□ 0.04
Alx3O70137 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx3O70137 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.29■□□□□ 0.04
Alx3O70137 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 Gm24841-201ENSMUST00000158676 357 ntBASIC15.29■□□□□ 0.04
Alx3O70137 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.29■□□□□ 0.04
Alx3O70137 Gm10517-202ENSMUST00000192970 758 ntBASIC15.29■□□□□ 0.04
Alx3O70137 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Alx3O70137 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms