Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.57□□□□□ -0.4
Rpl35aO55142 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Rpl35aO55142 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.57□□□□□ -0.4
Rpl35aO55142 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rpl35aO55142 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rpl35aO55142 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl35aO55142 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.57□□□□□ -0.4
Rpl35aO55142 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rpl35aO55142 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.56□□□□□ -0.4
Rpl35aO55142 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpl35aO55142 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Gm18958-201ENSMUST00000174258 762 ntBASIC12.56□□□□□ -0.4
Rpl35aO55142 Gm10231-201ENSMUST00000181584 441 ntBASIC12.56□□□□□ -0.4
Rpl35aO55142 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Gm10175-202ENSMUST00000208752 441 ntBASIC12.56□□□□□ -0.4
Rpl35aO55142 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.56□□□□□ -0.4
Rpl35aO55142 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpl35aO55142 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpl35aO55142 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpl35aO55142 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpl35aO55142 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rpl35aO55142 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl35aO55142 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpl35aO55142 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpl35aO55142 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rpl35aO55142 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.55□□□□□ -0.4
Rpl35aO55142 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.55□□□□□ -0.4
Rpl35aO55142 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl35aO55142 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Gm17661-201ENSMUST00000170317 270 ntBASIC12.54□□□□□ -0.4
Rpl35aO55142 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms