Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.04■□□□□ -0
OtpO09113 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
OtpO09113 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
OtpO09113 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.04■□□□□ -0
OtpO09113 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.04■□□□□ -0
OtpO09113 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
OtpO09113 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.04■□□□□ -0
OtpO09113 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.04■□□□□ -0
OtpO09113 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
OtpO09113 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
OtpO09113 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
OtpO09113 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.04■□□□□ -0
OtpO09113 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
OtpO09113 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.03■□□□□ -0
OtpO09113 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.03■□□□□ -0
OtpO09113 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
OtpO09113 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
OtpO09113 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OtpO09113 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
OtpO09113 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.02■□□□□ -0
OtpO09113 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.02■□□□□ -0
OtpO09113 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OtpO09113 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
OtpO09113 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.02■□□□□ -0
OtpO09113 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.02■□□□□ -0
OtpO09113 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.02■□□□□ -0
OtpO09113 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.02■□□□□ -0
OtpO09113 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
OtpO09113 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
OtpO09113 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OtpO09113 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
OtpO09113 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OtpO09113 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
OtpO09113 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OtpO09113 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
OtpO09113 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.01□□□□□ -0.01
OtpO09113 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.01□□□□□ -0.01
OtpO09113 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.01□□□□□ -0.01
OtpO09113 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.01□□□□□ -0.01
OtpO09113 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
OtpO09113 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OtpO09113 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15□□□□□ -0.01
OtpO09113 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15□□□□□ -0.01
OtpO09113 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
OtpO09113 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
OtpO09113 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15□□□□□ -0.01
OtpO09113 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms