Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Gm9987-201ENSMUST00000069768 567 ntBASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4lE9Q2N0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4lE9Q2N0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4lE9Q2N0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Actl10-202ENSMUST00000226583 1501 ntBASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms