Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Haglr-201ENSMUST00000100000 2085 ntBASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Gm12382-201ENSMUST00000122005 922 ntBASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim30cD3YVI9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim30cD3YVI9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Gm715-201ENSMUST00000117865 831 ntBASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim30cD3YVI9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim30cD3YVI9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim30cD3YVI9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim30cD3YVI9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim30cD3YVI9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim30cD3YVI9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim30cD3YVI9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim30cD3YVI9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim30cD3YVI9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms