Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn3aA2ASI5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn3aA2ASI5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn3aA2ASI5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn3aA2ASI5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn3aA2ASI5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn3aA2ASI5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.79■□□□□ 0.6
Scn3aA2ASI5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Gm12644-201ENSMUST00000119935 606 ntBASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn3aA2ASI5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn3aA2ASI5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn3aA2ASI5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn3aA2ASI5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.77■□□□□ 0.6
Scn3aA2ASI5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn3aA2ASI5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.77■□□□□ 0.6
Scn3aA2ASI5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Scn3aA2ASI5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn3aA2ASI5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Gm27867-201ENSMUST00000184778 125 ntBASIC18.76■□□□□ 0.59
Scn3aA2ASI5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Gm43347-201ENSMUST00000200226 580 ntBASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Mzt1-203ENSMUST00000227948 952 ntBASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn3aA2ASI5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn3aA2ASI5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn3aA2ASI5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn3aA2ASI5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Scn3aA2ASI5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.74■□□□□ 0.59
Scn3aA2ASI5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn3aA2ASI5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn3aA2ASI5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms