Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
IsxA1A546 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.74■□□□□ 0.11
IsxA1A546 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IsxA1A546 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IsxA1A546 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IsxA1A546 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IsxA1A546 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
IsxA1A546 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
IsxA1A546 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Gm29257-201ENSMUST00000186115 639 ntBASIC15.73■□□□□ 0.11
IsxA1A546 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
IsxA1A546 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
IsxA1A546 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
IsxA1A546 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.73■□□□□ 0.11
IsxA1A546 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
IsxA1A546 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IsxA1A546 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
IsxA1A546 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.72■□□□□ 0.11
IsxA1A546 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.72■□□□□ 0.11
IsxA1A546 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
IsxA1A546 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
IsxA1A546 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.72■□□□□ 0.11
IsxA1A546 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IsxA1A546 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
IsxA1A546 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
IsxA1A546 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
IsxA1A546 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.71■□□□□ 0.11
IsxA1A546 Gm37179-201ENSMUST00000194862 823 ntBASIC15.71■□□□□ 0.11
IsxA1A546 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
IsxA1A546 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IsxA1A546 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
IsxA1A546 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
IsxA1A546 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IsxA1A546 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
IsxA1A546 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
IsxA1A546 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IsxA1A546 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IsxA1A546 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
IsxA1A546 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
IsxA1A546 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
IsxA1A546 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Gm13234-201ENSMUST00000120010 747 ntBASIC15.7■□□□□ 0.1
IsxA1A546 Gm13534-201ENSMUST00000121169 513 ntBASIC15.7■□□□□ 0.1
IsxA1A546 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.7■□□□□ 0.1
IsxA1A546 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.7■□□□□ 0.1
IsxA1A546 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms