Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-1A0N8R1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav12-1A0N8R1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav12-1A0N8R1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trav12-1A0N8R1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav12-1A0N8R1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav12-1A0N8R1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav12-1A0N8R1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Gm20049-201ENSMUST00000219950 730 ntBASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-1A0N8R1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Gm43183-201ENSMUST00000200632 547 ntBASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms