Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Gm15378-201ENSMUST00000121894 207 ntBASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc112A0AUP1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc112A0AUP1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc112A0AUP1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.27■□□□□ 0.67
Ccdc112A0AUP1 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.27■□□□□ 0.67
Ccdc112A0AUP1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc112A0AUP1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Gm10698-201ENSMUST00000182663 604 ntBASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc112A0AUP1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc112A0AUP1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc112A0AUP1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Gm15039-201ENSMUST00000118914 875 ntBASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms