Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb8A0A140LI48 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb8A0A140LI48 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb8A0A140LI48 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb8A0A140LI48 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb8A0A140LI48 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb8A0A140LI48 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm15375-201ENSMUST00000119510 849 ntBASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhgb8A0A140LI48 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms