Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gm17807-201ENSMUST00000186869 298 ntBASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-45A0A0B4J1J1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.21■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm28033-201ENSMUST00000184224 96 ntBASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms