Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm7514-201ENSMUST00000209475 934 ntBASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm11643-201ENSMUST00000119578 864 ntBASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trbv20A0A0B4J1H5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv20A0A0B4J1H5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Flg-201ENSMUST00000050758 1488 ntBASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms