Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gm18421-201ENSMUST00000204122 625 ntBASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-42A0A0A6YY38 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.55■□□□□ 0.08
Ighv1-42A0A0A6YY38 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ighv1-42A0A0A6YY38 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ighv1-42A0A0A6YY38 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-42A0A0A6YY38 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.52■□□□□ 0.07
Ighv1-42A0A0A6YY38 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-42A0A0A6YY38 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-42A0A0A6YY38 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms