Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm15375-201ENSMUST00000119510 849 ntBASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm715-201ENSMUST00000117865 831 ntBASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-7A0A075B6B0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-7A0A075B6B0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Mir6349-201ENSMUST00000184059 97 ntBASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms