Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Trav12d-3A0A075B6A4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-3A0A075B6A4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12d-3A0A075B6A4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-3A0A075B6A4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms