Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.44□□□□□ -0.26
Trav17A0A075B655 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Mtag2-201ENSMUST00000058665 714 ntBASIC13.43□□□□□ -0.26
Trav17A0A075B655 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav17A0A075B655 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Gm6576-201ENSMUST00000169678 883 ntBASIC13.42□□□□□ -0.26
Trav17A0A075B655 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Rab3c-203ENSMUST00000224180 967 ntBASIC13.42□□□□□ -0.26
Trav17A0A075B655 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav17A0A075B655 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Dancr-204ENSMUST00000132389 2347 ntBASIC13.41□□□□□ -0.26
Trav17A0A075B655 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Gm10138-203ENSMUST00000206952 366 ntBASIC13.41□□□□□ -0.26
Trav17A0A075B655 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav17A0A075B655 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms