Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Gm13216-201ENSMUST00000117145 591 ntBASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-4A0A075B654 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Idnk-204ENSMUST00000226010 1898 ntBASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-4A0A075B654 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-4A0A075B654 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-4A0A075B654 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-4A0A075B654 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms