Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-4A0A075B652 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-4A0A075B652 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-4A0A075B652 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Gm5643-201ENSMUST00000117081 966 ntBASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Gm15378-201ENSMUST00000121894 207 ntBASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms