Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Gm12382-201ENSMUST00000122005 922 ntBASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Gm18025-201ENSMUST00000221733 862 ntBASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9n-4A0A075B631 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9n-4A0A075B631 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Gm4974-201ENSMUST00000209974 875 ntBASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms