Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm26571-201ENSMUST00000181399 666 ntBASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm18284-201ENSMUST00000172604 624 ntBASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms