Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-55A0A075B5W6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm10252-201ENSMUST00000209541 832 ntBASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-55A0A075B5W6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm11539-201ENSMUST00000119837 557 ntBASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm13436-201ENSMUST00000120418 567 ntBASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-55A0A075B5W6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-55A0A075B5W6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm2274-201ENSMUST00000184539 609 ntBASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-55A0A075B5W6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms