Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC092821.2-201ENST00000545710 2042 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SKP250-201ENST00000363924 321 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AL606662.1-201ENST00000445763 553 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AL354714.5-201ENST00000450131 590 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 MTND1P9-201ENST00000453775 944 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SL568P-201ENST00000493069 298 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC097173.1-201ENST00000505862 819 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 GAPDHP71-201ENST00000511530 1003 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC005261.5-201ENST00000596280 355 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AC068726.1-201ENST00000610993 341 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 TCP1P3-201ENST00000414406 1498 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RNU4-51P-201ENST00000364206 140 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RNU4-12P-201ENST00000365233 139 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AL133260.1-201ENST00000405720 405 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SKP205-201ENST00000410999 307 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RPL23AP18-201ENST00000416139 468 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RPL17P17-201ENST00000419491 557 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 OR8F1P-201ENST00000425243 930 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 COX6CP2-201ENST00000444980 225 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC006326.1-201ENST00000445465 787 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SL834P-201ENST00000461450 286 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 SETP11-201ENST00000473027 690 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC008967.1-201ENST00000504843 163 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RNA5SP318-201ENST00000516352 92 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AP005902.2-201ENST00000518393 307 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 OR5AM1P-201ENST00000532136 1032 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC026458.1-201ENST00000564330 438 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 ULK4P1-202ENST00000565174 503 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC006504.3-201ENST00000586818 523 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RPS4XP21-201ENST00000603814 750 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AL031658.2-201ENST00000616850 651 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms