Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN2P57739 AC027308.1-201ENST00000517993 110 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLDN2P57739 AC244502.2-201ENST00000543361 851 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLDN2P57739 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN2P57739 DPPA3P2-201ENST00000553589 478 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 AC092868.3-201ENST00000560515 784 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 AC093524.1-201ENST00000564266 1094 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 AC007346.2-201ENST00000564816 892 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.68□□□□□ -1.5
CLDN2P57739 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN2P57739 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN2P57739 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN2P57739 AC007683.2-201ENST00000624681 714 ntBASIC5.68□□□□□ -1.5
CLDN2P57739 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN2P57739 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN2P57739 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN2P57739 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLDN2P57739 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLDN2P57739 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN2P57739 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC020656.2-201ENST00000613291 5309 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN2P57739 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 BMS1P13-201ENST00000417301 885 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC113412.1-201ENST00000425840 504 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 MTCO1P51-201ENST00000427672 1060 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 SUMO2P1-206ENST00000445436 284 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AP000547.1-201ENST00000454360 617 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AL445687.2-201ENST00000458156 728 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AL133445.1-201ENST00000467051 452 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AC104629.2-201ENST00000468627 598 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 RPL35AP19-201ENST00000469425 329 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 RN7SL570P-201ENST00000484405 292 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC090424.1-201ENST00000535243 736 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC008147.3-201ENST00000548666 354 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 CKS1BP1-201ENST00000555221 240 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.67□□□□□ -1.5
CLDN2P57739 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 AL355802.4-201ENST00000607635 548 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC007204.2-201ENST00000615022 616 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN2P57739 AC106858.1-201ENST00000637497 429 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 OFD1P17-201ENST00000437639 3018 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 AC068769.1-201ENST00000474767 2426 ntBASIC5.67□□□□□ -1.5
CLDN2P57739 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN2P57739 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN2P57739 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLDN2P57739 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN2P57739 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN2P57739 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN2P57739 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN2P57739 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.66□□□□□ -1.5
CLDN2P57739 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN2P57739 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN2P57739 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN2P57739 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN2P57739 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN2P57739 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CLDN2P57739 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN2P57739 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLDN2P57739 RNA5SP131-201ENST00000365452 119 ntBASIC5.66□□□□□ -1.5
CLDN2P57739 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN2P57739 AL391422.1-201ENST00000402155 436 ntBASIC5.66□□□□□ -1.5
CLDN2P57739 AL356057.1-202ENST00000402263 756 ntBASIC5.66□□□□□ -1.5
CLDN2P57739 CBX1P3-201ENST00000413296 527 ntBASIC5.66□□□□□ -1.5
CLDN2P57739 AC017078.1-201ENST00000416146 368 ntBASIC5.66□□□□□ -1.5
CLDN2P57739 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms