Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RFC4P35249 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 PANDAR-201ENST00000629595 1506 ntBASIC6.92□□□□□ -1.3
RFC4P35249 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RFC4P35249 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.92□□□□□ -1.3
RFC4P35249 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RFC4P35249 RNA5SP91-201ENST00000390902 119 ntBASIC6.92□□□□□ -1.3
RFC4P35249 OR4K12P-201ENST00000406538 961 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC016397.1-201ENST00000412463 242 ntBASIC6.92□□□□□ -1.3
RFC4P35249 CRIP1P1-201ENST00000427567 185 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AL360081.1-201ENST00000428299 555 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AL672138.1-201ENST00000450604 1015 ntBASIC6.92□□□□□ -1.3
RFC4P35249 RPS3AP53-201ENST00000454716 778 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.92□□□□□ -1.3
RFC4P35249 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.92□□□□□ -1.3
RFC4P35249 TOMM22P4-201ENST00000511318 336 ntBASIC6.92□□□□□ -1.3
RFC4P35249 PMS2P3-207ENST00000529061 717 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.92□□□□□ -1.3
RFC4P35249 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.92□□□□□ -1.3
RFC4P35249 NMNAT1P5-201ENST00000559657 841 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AP005403.1-201ENST00000579720 229 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.92□□□□□ -1.3
RFC4P35249 AC011447.4-201ENST00000587562 111 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC006115.2-201ENST00000596823 202 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC087783.2-201ENST00000605070 562 ntBASIC6.92□□□□□ -1.3
RFC4P35249 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC012557.1-201ENST00000607115 611 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AL731566.2-201ENST00000618971 317 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC010435.1-201ENST00000623353 1177 ntBASIC6.92□□□□□ -1.3
RFC4P35249 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
RFC4P35249 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
RFC4P35249 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.92□□□□□ -1.3
RFC4P35249 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.92□□□□□ -1.3
RFC4P35249 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFC4P35249 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFC4P35249 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFC4P35249 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.91□□□□□ -1.3
RFC4P35249 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.91□□□□□ -1.3
RFC4P35249 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.91□□□□□ -1.3
RFC4P35249 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RFC4P35249 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RFC4P35249 RNA5SP123-201ENST00000363244 119 ntBASIC6.91□□□□□ -1.3
RFC4P35249 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
RFC4P35249 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RFC4P35249 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.91□□□□□ -1.3
RFC4P35249 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.91□□□□□ -1.3
RFC4P35249 RPS3AP38-201ENST00000435889 763 ntBASIC6.91□□□□□ -1.3
RFC4P35249 TPT1P13-201ENST00000449760 499 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AL445687.2-201ENST00000458156 728 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AC009127.1-201ENST00000467090 155 ntBASIC6.91□□□□□ -1.3
RFC4P35249 TRBV5-2-201ENST00000489095 273 ntBASIC6.91□□□□□ -1.3
RFC4P35249 RPS4XP20-201ENST00000505751 772 ntBASIC6.91□□□□□ -1.3
RFC4P35249 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.91□□□□□ -1.3
RFC4P35249 AC004980.4-201ENST00000513375 203 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AC027667.1-201ENST00000545814 304 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AL163952.1-202ENST00000569625 600 ntBASIC6.91□□□□□ -1.3
RFC4P35249 H3F3BP2-201ENST00000583907 357 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AC087283.1-201ENST00000604029 1074 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AC018690.1-201ENST00000608144 626 ntBASIC6.91□□□□□ -1.3
RFC4P35249 uc_338.18-201ENST00000615451 175 ntBASIC6.91□□□□□ -1.3
RFC4P35249 AC099494.2-201ENST00000623371 978 ntBASIC6.91□□□□□ -1.3
RFC4P35249 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFC4P35249 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFC4P35249 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.91□□□□□ -1.3
RFC4P35249 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.91□□□□□ -1.3
RFC4P35249 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
RFC4P35249 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.9□□□□□ -1.3
RFC4P35249 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
RFC4P35249 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RFC4P35249 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFC4P35249 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RFC4P35249 RN7SKP104-201ENST00000362605 328 ntBASIC6.9□□□□□ -1.3
RFC4P35249 RNU6-316P-201ENST00000391027 107 ntBASIC6.9□□□□□ -1.3
RFC4P35249 RNA5SP487-201ENST00000410186 122 ntBASIC6.9□□□□□ -1.3
RFC4P35249 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.9□□□□□ -1.3
RFC4P35249 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.9□□□□□ -1.3
RFC4P35249 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.9□□□□□ -1.3
RFC4P35249 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.9□□□□□ -1.3
RFC4P35249 RPL31P44-201ENST00000447680 377 ntBASIC6.9□□□□□ -1.3
RFC4P35249 AL451063.1-201ENST00000450164 1133 ntBASIC6.9□□□□□ -1.3
RFC4P35249 snoU13.20-201ENST00000459180 104 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms