Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC007068.1-201ENST00000396690 844 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC073508.1-201ENST00000428866 656 ntBASIC5.69□□□□□ -1.5
PCNAP12004 UBE2V1P6-201ENST00000430840 422 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 KRT8P51-201ENST00000438938 274 ntBASIC5.69□□□□□ -1.5
PCNAP12004 ATP5LP2-201ENST00000440646 311 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.69□□□□□ -1.5
PCNAP12004 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 AC023245.1-201ENST00000468501 517 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC015908.1-201ENST00000478739 476 ntBASIC5.69□□□□□ -1.5
PCNAP12004 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 AL117692.1-201ENST00000494283 713 ntBASIC5.69□□□□□ -1.5
PCNAP12004 RN7SL284P-201ENST00000498823 275 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC067904.2-201ENST00000517322 1283 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
PCNAP12004 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 AL845552.1-201ENST00000556820 323 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.69□□□□□ -1.5
PCNAP12004 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.69□□□□□ -1.5
PCNAP12004 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.69□□□□□ -1.5
PCNAP12004 AP005119.1-201ENST00000580956 292 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.69□□□□□ -1.5
PCNAP12004 AC005776.1-201ENST00000603164 290 ntBASIC5.69□□□□□ -1.5
PCNAP12004 BNIP3P19-201ENST00000605397 577 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AL450270.1-201ENST00000606160 391 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC012213.4-201ENST00000606457 354 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AL022394.1-201ENST00000606979 292 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC024933.1-201ENST00000608472 348 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 OR8G7P-201ENST00000616658 848 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AL445670.1-201ENST00000618889 801 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC074140.1-201ENST00000621617 208 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCNAP12004 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PCNAP12004 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PCNAP12004 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.69□□□□□ -1.5
PCNAP12004 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 SELENOWP1-201ENST00000322792 252 ntBASIC5.68□□□□□ -1.5
PCNAP12004 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 RNU1-65P-201ENST00000363919 148 ntBASIC5.68□□□□□ -1.5
PCNAP12004 U3.10-201ENST00000364459 214 ntBASIC5.68□□□□□ -1.5
PCNAP12004 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 ST13P16-201ENST00000401760 781 ntBASIC5.68□□□□□ -1.5
PCNAP12004 SNORA79B-201ENST00000410557 148 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 RPS4XP5-201ENST00000419038 768 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC023141.6-201ENST00000429418 337 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 PNKDP1-201ENST00000435914 430 ntBASIC5.68□□□□□ -1.5
PCNAP12004 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 ARL5AP3-201ENST00000439327 386 ntBASIC5.68□□□□□ -1.5
PCNAP12004 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.68□□□□□ -1.5
PCNAP12004 RN7SL72P-201ENST00000460697 269 ntBASIC5.68□□□□□ -1.5
PCNAP12004 RN7SL269P-201ENST00000467795 305 ntBASIC5.68□□□□□ -1.5
PCNAP12004 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 RPL38P3-201ENST00000484463 213 ntBASIC5.68□□□□□ -1.5
PCNAP12004 OR11I1P-201ENST00000486033 954 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 AC122718.2-201ENST00000505325 591 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 FABP5P6-201ENST00000510588 409 ntBASIC5.68□□□□□ -1.5
PCNAP12004 HMGB1P47-201ENST00000511281 589 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 snoU109.5-201ENST00000516231 132 ntBASIC5.68□□□□□ -1.5
PCNAP12004 MIR2117-201ENST00000516780 80 ntBASIC5.68□□□□□ -1.5
PCNAP12004 RNU6-889P-201ENST00000517189 103 ntBASIC5.68□□□□□ -1.5
PCNAP12004 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.68□□□□□ -1.5
PCNAP12004 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 AC002310.3-201ENST00000569728 723 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC019322.1-201ENST00000571869 389 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.68□□□□□ -1.5
PCNAP12004 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 MIMT1-201ENST00000597105 1050 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms