Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC241584.2-201ENST00000637142 2090 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 GAPDHP24-201ENST00000328713 983 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AL353692.2-201ENST00000407054 335 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 VN1R21P-201ENST00000426703 765 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC011242.1-201ENST00000433596 1158 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 MEMO1P4-201ENST00000453590 386 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 GTF2IP9-201ENST00000502460 301 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 SNORA70.17-201ENST00000516449 133 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC134349.2-201ENST00000535136 910 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 MTND1P24-201ENST00000552175 861 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC006115.2-201ENST00000596823 202 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 AP000484.1-201ENST00000620067 1252 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 MIR8080-201ENST00000622224 89 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 MTCO1P15-201ENST00000529569 1526 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 MTCO1P4-201ENST00000520516 1409 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-DOAP06340 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.74□□□□□ -1.33
HLA-DOAP06340 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HLA-DOAP06340 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AL161756.3-201ENST00000641216 2071 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 LINC01963-201ENST00000562038 3148 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 RNA5SP319-201ENST00000362768 119 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 MIR1178-201ENST00000408396 91 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 RPS6P23-201ENST00000413224 722 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 MTCO1P57-201ENST00000432182 261 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 CFL1P1-202ENST00000432948 411 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 NPM1P48-201ENST00000436002 853 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 TPTE2P3-201ENST00000441562 1189 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC092106.1-201ENST00000444291 373 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AL450023.1-201ENST00000450868 751 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 MTATP6P14-201ENST00000455189 673 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AL356390.1-201ENST00000455684 397 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 RPL35AP19-201ENST00000469425 329 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 RN7SL583P-201ENST00000475692 287 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 RN7SL547P-201ENST00000490793 290 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 TOMM22P4-201ENST00000511318 336 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC027308.1-201ENST00000517993 110 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC027026.1-201ENST00000532323 742 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 HSPE1P2-201ENST00000554777 306 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 CD24P2-201ENST00000565486 219 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 AL163952.1-202ENST00000569625 600 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AC013244.1-201ENST00000604279 193 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 AL356118.1-201ENST00000635272 1078 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms