Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 HMGB1P20-201ENST00000402555 677 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AL592429.1-201ENST00000403909 1473 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RPS3AP2-201ENST00000407190 754 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RNF10P1-201ENST00000418589 369 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AL359265.1-201ENST00000440296 795 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AZGP1P2-201ENST00000454506 345 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 UBFD1P1-201ENST00000473259 814 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RN7SL583P-201ENST00000475692 287 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 ATP5LP5-201ENST00000483050 299 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RPS3AP15-201ENST00000483874 781 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RPSAP51-201ENST00000497462 645 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 SNORA70.20-201ENST00000516848 126 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AL583832.1-201ENST00000603227 784 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AC087565.3-203ENST00000641018 837 ntBASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF3BQ9BZI7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC016745.2-201ENST00000608834 3443 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC007394.1-201ENST00000421941 531 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AL022331.1-201ENST00000429025 477 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 RPL5P2-201ENST00000429598 854 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 RPL32P9-201ENST00000487963 407 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC118658.2-201ENST00000618697 459 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC021766.1-201ENST00000624404 741 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AL359715.3-201ENST00000569267 2123 ntBASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UPF3BQ9BZI7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC079097.1-201ENST00000512187 1399 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AL162456.1-201ENST00000634535 2006 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RN7SKP160-201ENST00000363804 340 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RNA5SP394-201ENST00000364216 119 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RMRPP5-201ENST00000411156 267 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC009784.1-201ENST00000426484 460 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RPL7P56-201ENST00000429441 717 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 NPM1P18-201ENST00000434232 732 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 GAPDHP58-201ENST00000438477 1006 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RN7SL515P-201ENST00000463999 297 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms