Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 AL163952.1-202ENST00000569625 600 ntBASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 HIRAP1-201ENST00000605318 787 ntBASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 AC109309.2-201ENST00000612597 332 ntBASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFWD3Q6PCD5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC104964.3-201ENST00000606115 2860 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC068870.1-201ENST00000563737 2455 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 GAPDHP24-201ENST00000328713 983 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 RNA5SP326-201ENST00000363209 110 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC096921.1-201ENST00000411661 375 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC019185.1-201ENST00000442718 389 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 RPL35AP19-201ENST00000469425 329 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 NPM1P28-201ENST00000492269 840 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 EIF3LP3-201ENST00000495197 822 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC021146.10-201ENST00000515628 706 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC027216.1-201ENST00000577726 685 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 DHFRP1-201ENST00000579682 559 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AP000894.4-201ENST00000610185 483 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC022467.1-201ENST00000614738 749 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC005618.4-201ENST00000625053 554 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 AC123912.3-201ENST00000600907 1367 ntBASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.8□□□□□ -1.48
RFWD3Q6PCD5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 RNA5SP132-201ENST00000364725 118 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 PEX12P1-201ENST00000400284 1048 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 OR3A2-201ENST00000408891 1076 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 GABARAPL3-201ENST00000412799 354 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 BX119904.3-201ENST00000428194 957 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 RANP1-206ENST00000455094 651 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 RN7SL184P-201ENST00000488308 297 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 PDCL3P4-201ENST00000489621 720 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC105420.1-201ENST00000504389 582 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC016839.1-201ENST00000578162 867 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 AL034374.2-201ENST00000605281 548 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 PPATP2-201ENST00000605635 508 ntBASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFWD3Q6PCD5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFWD3Q6PCD5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
RFWD3Q6PCD5 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.78□□□□□ -1.48
RFWD3Q6PCD5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFWD3Q6PCD5 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFWD3Q6PCD5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms