Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.39□□□□□ -1.55
PKNOX1P55347 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.39□□□□□ -1.55
PKNOX1P55347 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC073592.6-201ENST00000624271 415 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC132825.8-201ENST00000640783 297 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PKNOX1P55347 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 ADAM5-202ENST00000399789 1942 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PKNOX1P55347 AC144833.1-201ENST00000567953 4089 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.38□□□□□ -1.55
PKNOX1P55347 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 AC007842.1-201ENST00000597336 2039 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PKNOX1P55347 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.38□□□□□ -1.55
PKNOX1P55347 PPIAP9-201ENST00000403866 498 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AC013410.1-201ENST00000436223 1232 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.38□□□□□ -1.55
PKNOX1P55347 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.38□□□□□ -1.55
PKNOX1P55347 AP000797.2-201ENST00000475768 606 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.38□□□□□ -1.55
PKNOX1P55347 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.38□□□□□ -1.55
PKNOX1P55347 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.38□□□□□ -1.55
PKNOX1P55347 SNORA70.20-201ENST00000516848 126 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AC027026.1-201ENST00000532323 742 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
PKNOX1P55347 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.38□□□□□ -1.55
PKNOX1P55347 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.38□□□□□ -1.55
PKNOX1P55347 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.38□□□□□ -1.55
PKNOX1P55347 DPPA2P4-201ENST00000563717 878 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AC008833.1-201ENST00000611633 691 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AC025574.2-201ENST00000615621 514 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 AL390318.1-201ENST00000624564 687 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PKNOX1P55347 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PKNOX1P55347 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PKNOX1P55347 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKNOX1P55347 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.38□□□□□ -1.55
PKNOX1P55347 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.38□□□□□ -1.55
PKNOX1P55347 HCFC2P1-201ENST00000392864 1592 ntBASIC5.38□□□□□ -1.55
PKNOX1P55347 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 TET1P1-201ENST00000426627 2301 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.37□□□□□ -1.55
PKNOX1P55347 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.37□□□□□ -1.55
PKNOX1P55347 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.37□□□□□ -1.55
PKNOX1P55347 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PKNOX1P55347 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 RPSAP35-201ENST00000413753 818 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 CTSLP6-201ENST00000458273 1002 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 RN7SL583P-201ENST00000475692 287 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 MORF4L2P1-201ENST00000503761 858 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 GOLGA5P1-201ENST00000507317 980 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 AC060775.1-201ENST00000518241 520 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 MRPS16P1-201ENST00000523462 412 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 AC130364.2-201ENST00000528639 604 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.37□□□□□ -1.55
PKNOX1P55347 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.37□□□□□ -1.55
PKNOX1P55347 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.37□□□□□ -1.55
PKNOX1P55347 RN7SL290P-201ENST00000578661 300 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.37□□□□□ -1.55
PKNOX1P55347 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PKNOX1P55347 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 Z95327.3-201ENST00000610385 572 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms