Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.05□□□□□ -1.28
MRE11P49959 AL158152.1-201ENST00000602652 1435 ntBASIC7.05□□□□□ -1.28
MRE11P49959 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
MRE11P49959 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
MRE11P49959 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 RNA5SP187-201ENST00000384400 119 ntBASIC7.05□□□□□ -1.28
MRE11P49959 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
MRE11P49959 LYPLA1P3-201ENST00000402650 695 ntBASIC7.05□□□□□ -1.28
MRE11P49959 SLC20A1P1-201ENST00000413906 956 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 ETF1P1-206ENST00000427296 984 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AL645939.3-201ENST00000435408 225 ntBASIC7.05□□□□□ -1.28
MRE11P49959 RPL23AP19-201ENST00000436229 369 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.05□□□□□ -1.28
MRE11P49959 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.05□□□□□ -1.28
MRE11P49959 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 RN7SL254P-201ENST00000460609 284 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AC073594.1-201ENST00000462065 364 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AP002371.1-201ENST00000463604 433 ntBASIC7.05□□□□□ -1.28
MRE11P49959 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.05□□□□□ -1.28
MRE11P49959 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.05□□□□□ -1.28
MRE11P49959 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 AL390198.2-201ENST00000510553 222 ntBASIC7.05□□□□□ -1.28
MRE11P49959 SNORA74.1-201ENST00000516320 180 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.05□□□□□ -1.28
MRE11P49959 HIGD1AP5-201ENST00000529959 259 ntBASIC7.05□□□□□ -1.28
MRE11P49959 PPIAP6-201ENST00000557078 499 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AC027176.2-201ENST00000559166 746 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AC007225.2-201ENST00000562529 256 ntBASIC7.05□□□□□ -1.28
MRE11P49959 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC7.05□□□□□ -1.28
MRE11P49959 RPL29P33-201ENST00000587474 316 ntBASIC7.05□□□□□ -1.28
MRE11P49959 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 AC100767.2-201ENST00000604840 693 ntBASIC7.05□□□□□ -1.28
MRE11P49959 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.05□□□□□ -1.28
MRE11P49959 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.05□□□□□ -1.28
MRE11P49959 AC006924.1-201ENST00000610750 559 ntBASIC7.05□□□□□ -1.28
MRE11P49959 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AC006328.2-201ENST00000623198 397 ntBASIC7.05□□□□□ -1.28
MRE11P49959 AC012005.2-201ENST00000624333 397 ntBASIC7.05□□□□□ -1.28
MRE11P49959 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 AL034546.1-201ENST00000623740 3693 ntBASIC7.05□□□□□ -1.28
MRE11P49959 ICE2P1-201ENST00000512800 1849 ntBASIC7.05□□□□□ -1.28
MRE11P49959 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.05□□□□□ -1.28
MRE11P49959 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.05□□□□□ -1.28
MRE11P49959 MAPK10-338ENST00000641647 3362 ntBASIC7.05□□□□□ -1.28
MRE11P49959 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
MRE11P49959 AL645568.2-201ENST00000432815 1337 ntBASIC7.04□□□□□ -1.28
MRE11P49959 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
MRE11P49959 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
MRE11P49959 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
MRE11P49959 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
MRE11P49959 RNU6-386P-201ENST00000362650 107 ntBASIC7.04□□□□□ -1.28
MRE11P49959 RN7SKP162-201ENST00000363605 345 ntBASIC7.04□□□□□ -1.28
MRE11P49959 RNU6-670P-201ENST00000364312 104 ntBASIC7.04□□□□□ -1.28
MRE11P49959 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
MRE11P49959 AL445238.1-204ENST00000400311 463 ntBASIC7.04□□□□□ -1.28
MRE11P49959 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
MRE11P49959 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AL606490.8-201ENST00000441624 319 ntBASIC7.04□□□□□ -1.28
MRE11P49959 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AC078857.1-201ENST00000469870 667 ntBASIC7.04□□□□□ -1.28
MRE11P49959 AC090589.1-201ENST00000473109 362 ntBASIC7.04□□□□□ -1.28
MRE11P49959 AC099340.1-201ENST00000475247 599 ntBASIC7.04□□□□□ -1.28
MRE11P49959 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 RN7SL413P-201ENST00000482700 297 ntBASIC7.04□□□□□ -1.28
MRE11P49959 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC7.04□□□□□ -1.28
MRE11P49959 TRIM77BP-201ENST00000524985 1119 ntBASIC7.04□□□□□ -1.28
MRE11P49959 LRRC34P1-201ENST00000542742 915 ntBASIC7.04□□□□□ -1.28
MRE11P49959 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.04□□□□□ -1.28
MRE11P49959 AC135178.6-201ENST00000605314 398 ntBASIC7.04□□□□□ -1.28
MRE11P49959 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.04□□□□□ -1.28
MRE11P49959 AC012557.1-201ENST00000607115 611 ntBASIC7.04□□□□□ -1.28
MRE11P49959 AC009464.1-201ENST00000615731 469 ntBASIC7.04□□□□□ -1.28
MRE11P49959 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms