Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 OR5D2P-201ENST00000524390 911 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC024405.1-201ENST00000532521 1042 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 RBM22P12-201ENST00000567098 1255 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 MIR4271-201ENST00000582451 67 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC079315.1-201ENST00000602952 623 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC108865.2-201ENST00000606881 432 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AL096712.1-201ENST00000614561 159 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AL118522.2-201ENST00000616045 615 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC099654.6-201ENST00000636487 512 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC083837.1-201ENST00000565297 2994 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AC002525.1-201ENST00000624392 1622 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 RN7SKP28-201ENST00000364770 305 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 VN1R12P-201ENST00000403778 876 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AL136231.1-201ENST00000429407 730 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 FMO7P-201ENST00000436045 768 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC090804.1-201ENST00000448870 490 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 RN7SL72P-201ENST00000460697 269 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC092754.1-201ENST00000472975 479 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC093827.1-201ENST00000480094 861 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 MTND6P2-201ENST00000512226 524 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 CYCSP22-201ENST00000517555 339 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC005363.1-201ENST00000530779 351 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 AL499605.1-201ENST00000604628 403 ntBASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAV27A0A087WT01 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 AC004158.1-201ENST00000564508 4319 ntBASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 AL031595.2-201ENST00000624215 19071 ntBASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 AC006600.2-201ENST00000624834 2506 ntBASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 OR1L6-202ENST00000373684 1044 ntBASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 DBIP1-201ENST00000401435 260 ntBASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 HMGN1P20-201ENST00000411849 300 ntBASIC4.88□□□□□ -1.63
TRAV27A0A087WT01 OR2AT2P-201ENST00000413438 905 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms