Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AL117339.4-201ENST00000608335 7063 ntBASIC8.4□□□□□ -1.07
VPS8Q8N3P4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
VPS8Q8N3P4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.4□□□□□ -1.07
VPS8Q8N3P4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 PANDAR-201ENST00000629595 1506 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 MYO5BP2-201ENST00000449815 1277 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 RPL7P39-201ENST00000481157 744 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 RN7SL30P-201ENST00000488416 306 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 RPL15P21-201ENST00000495592 567 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 SAMMSON-227ENST00000642114 1199 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
VPS8Q8N3P4 Z95114.1-201ENST00000624264 14574 ntBASIC8.39□□□□□ -1.07
VPS8Q8N3P4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AC092747.4-201ENST00000620519 1861 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 SNORA58B-201ENST00000364259 136 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AL627308.1-201ENST00000435693 821 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AC004815.1-201ENST00000484185 331 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 RN7SL814P-201ENST00000487715 300 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AC016180.1-201ENST00000567945 403 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 AC007159.1-201ENST00000566529 4706 ntBASIC8.38□□□□□ -1.07
VPS8Q8N3P4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS8Q8N3P4 SNORA17.1-201ENST00000362945 126 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AL133482.1-201ENST00000415988 498 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC093655.2-201ENST00000425735 631 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC009784.1-201ENST00000426484 460 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC023271.1-201ENST00000445936 1090 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 NOP56P2-201ENST00000447491 769 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 Z92846.1-201ENST00000456203 268 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC090058.1-201ENST00000498788 435 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AP005131.7-201ENST00000610087 611 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC007786.3-201ENST00000615154 596 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC099654.6-201ENST00000636487 512 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 SNX18P3-202ENST00000565670 1750 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC138761.5-201ENST00000433967 325 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 RNA5SP116-201ENST00000516132 98 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 HAUS8P1-201ENST00000549005 542 ntBASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS8Q8N3P4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms