Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACTBP60709 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACTBP60709 MTND5P23-201ENST00000430812 1655 ntBASIC4.86□□□□□ -1.63
ACTBP60709 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACTBP60709 AL138820.1-201ENST00000617901 5305 ntBASIC4.86□□□□□ -1.63
ACTBP60709 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACTBP60709 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ACTBP60709 AC083843.2-201ENST00000568248 6253 ntBASIC4.85□□□□□ -1.63
ACTBP60709 THAP12P8-201ENST00000447914 2115 ntBASIC4.85□□□□□ -1.63
ACTBP60709 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ACTBP60709 AC093591.2-201ENST00000565254 3843 ntBASIC4.85□□□□□ -1.63
ACTBP60709 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ACTBP60709 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ACTBP60709 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.85□□□□□ -1.63
ACTBP60709 RN7SKP171-201ENST00000364417 303 ntBASIC4.85□□□□□ -1.63
ACTBP60709 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 AC005042.1-201ENST00000393397 800 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC233289.1-201ENST00000403700 508 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.85□□□□□ -1.63
ACTBP60709 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 DEFA9P-201ENST00000433042 285 ntBASIC4.85□□□□□ -1.63
ACTBP60709 NDUFB4P8-201ENST00000435351 367 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC073465.2-201ENST00000440938 498 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC093166.3-201ENST00000448785 303 ntBASIC4.85□□□□□ -1.63
ACTBP60709 TAAR4P-201ENST00000454843 1039 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 YRDCP3-201ENST00000456507 480 ntBASIC4.85□□□□□ -1.63
ACTBP60709 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.85□□□□□ -1.63
ACTBP60709 AC021006.1-201ENST00000489849 553 ntBASIC4.85□□□□□ -1.63
ACTBP60709 ENPP7P11-201ENST00000505915 627 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC018797.1-201ENST00000510791 255 ntBASIC4.85□□□□□ -1.63
ACTBP60709 RPS27AP18-201ENST00000515536 459 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.85□□□□□ -1.63
ACTBP60709 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.85□□□□□ -1.63
ACTBP60709 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.85□□□□□ -1.63
ACTBP60709 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.85□□□□□ -1.63
ACTBP60709 AC106730.2-201ENST00000566641 540 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 MIR4502-201ENST00000580432 81 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.85□□□□□ -1.63
ACTBP60709 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.85□□□□□ -1.63
ACTBP60709 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.85□□□□□ -1.63
ACTBP60709 AL121890.2-201ENST00000617644 465 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AC026367.3-201ENST00000619032 590 ntBASIC4.85□□□□□ -1.63
ACTBP60709 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.85□□□□□ -1.63
ACTBP60709 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ACTBP60709 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACTBP60709 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACTBP60709 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACTBP60709 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.85□□□□□ -1.63
ACTBP60709 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.85□□□□□ -1.63
ACTBP60709 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACTBP60709 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACTBP60709 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.85□□□□□ -1.63
ACTBP60709 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.84□□□□□ -1.63
ACTBP60709 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.84□□□□□ -1.63
ACTBP60709 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC104964.3-201ENST00000606115 2860 ntBASIC4.84□□□□□ -1.63
ACTBP60709 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 HSPD1P9-201ENST00000420325 1636 ntBASIC4.84□□□□□ -1.63
ACTBP60709 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 PCAT14-202ENST00000627127 3935 ntBASIC4.84□□□□□ -1.63
ACTBP60709 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 RNU6-729P-201ENST00000384399 107 ntBASIC4.84□□□□□ -1.63
ACTBP60709 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ACTBP60709 RNA5SP241-201ENST00000391326 114 ntBASIC4.84□□□□□ -1.63
ACTBP60709 VDAC2P1-201ENST00000399358 958 ntBASIC4.84□□□□□ -1.63
ACTBP60709 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AL354893.1-201ENST00000433735 348 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC023141.3-201ENST00000436698 278 ntBASIC4.84□□□□□ -1.63
ACTBP60709 IGBP1P3-201ENST00000447449 1000 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AL157777.1-201ENST00000468100 304 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AP000797.2-201ENST00000475768 606 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AL117692.1-201ENST00000494283 713 ntBASIC4.84□□□□□ -1.63
ACTBP60709 RN7SL649P-201ENST00000496974 275 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AC091874.2-201ENST00000505889 720 ntBASIC4.84□□□□□ -1.63
ACTBP60709 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC011411.1-201ENST00000509592 876 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AC074255.1-201ENST00000511259 501 ntBASIC4.84□□□□□ -1.63
ACTBP60709 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 RN7SKP183-201ENST00000517169 324 ntBASIC4.84□□□□□ -1.63
ACTBP60709 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 PMS2P3-207ENST00000529061 717 ntBASIC4.84□□□□□ -1.63
ACTBP60709 EIF4A2P5-201ENST00000529914 499 ntBASIC4.84□□□□□ -1.63
ACTBP60709 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.84□□□□□ -1.63
ACTBP60709 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms