Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDX1P52945 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDX1P52945 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDX1P52945 AC025470.1-201ENST00000510053 2032 ntBASIC5.57□□□□□ -1.52
PDX1P52945 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDX1P52945 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.57□□□□□ -1.52
PDX1P52945 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 RNA5SP234-201ENST00000363916 119 ntBASIC5.57□□□□□ -1.52
PDX1P52945 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.57□□□□□ -1.52
PDX1P52945 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.57□□□□□ -1.52
PDX1P52945 NPM1P22-201ENST00000427761 952 ntBASIC5.57□□□□□ -1.52
PDX1P52945 Z85994.2-201ENST00000434327 452 ntBASIC5.57□□□□□ -1.52
PDX1P52945 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.57□□□□□ -1.52
PDX1P52945 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 AL356390.1-201ENST00000455684 397 ntBASIC5.57□□□□□ -1.52
PDX1P52945 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 HMGN1P8-201ENST00000463578 288 ntBASIC5.57□□□□□ -1.52
PDX1P52945 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.57□□□□□ -1.52
PDX1P52945 AC099521.1-201ENST00000482557 334 ntBASIC5.57□□□□□ -1.52
PDX1P52945 RPS3AP15-201ENST00000483874 781 ntBASIC5.57□□□□□ -1.52
PDX1P52945 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.57□□□□□ -1.52
PDX1P52945 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.57□□□□□ -1.52
PDX1P52945 BX510359.5-201ENST00000515651 304 ntBASIC5.57□□□□□ -1.52
PDX1P52945 RN7SKP288-201ENST00000516227 268 ntBASIC5.57□□□□□ -1.52
PDX1P52945 SCARNA6.1-201ENST00000516989 238 ntBASIC5.57□□□□□ -1.52
PDX1P52945 OR4A42P-201ENST00000531397 938 ntBASIC5.57□□□□□ -1.52
PDX1P52945 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
PDX1P52945 VN1R81P-201ENST00000602085 372 ntBASIC5.57□□□□□ -1.52
PDX1P52945 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 AL354696.1-201ENST00000614652 497 ntBASIC5.57□□□□□ -1.52
PDX1P52945 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.57□□□□□ -1.52
PDX1P52945 AC007683.2-201ENST00000624681 714 ntBASIC5.57□□□□□ -1.52
PDX1P52945 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.57□□□□□ -1.52
PDX1P52945 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PDX1P52945 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.57□□□□□ -1.52
PDX1P52945 AL590763.1-201ENST00000398297 1545 ntBASIC5.57□□□□□ -1.52
PDX1P52945 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDX1P52945 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDX1P52945 AP000432.2-201ENST00000624164 2048 ntBASIC5.57□□□□□ -1.52
PDX1P52945 AL513548.1-201ENST00000562904 1724 ntBASIC5.57□□□□□ -1.52
PDX1P52945 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.56□□□□□ -1.52
PDX1P52945 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDX1P52945 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDX1P52945 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.56□□□□□ -1.52
PDX1P52945 THAP12P9-201ENST00000503971 2360 ntBASIC5.56□□□□□ -1.52
PDX1P52945 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDX1P52945 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 AL161756.3-201ENST00000641216 2071 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.56□□□□□ -1.52
PDX1P52945 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.56□□□□□ -1.52
PDX1P52945 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.56□□□□□ -1.52
PDX1P52945 MYL6P5-201ENST00000412707 459 ntBASIC5.56□□□□□ -1.52
PDX1P52945 OR5W1P-201ENST00000423705 938 ntBASIC5.56□□□□□ -1.52
PDX1P52945 RPL34P27-201ENST00000428810 349 ntBASIC5.56□□□□□ -1.52
PDX1P52945 USP24P1-201ENST00000433802 779 ntBASIC5.56□□□□□ -1.52
PDX1P52945 PTMAP6-201ENST00000439110 327 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AL663074.2-201ENST00000440621 479 ntBASIC5.56□□□□□ -1.52
PDX1P52945 MTND2P3-201ENST00000452458 470 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.56□□□□□ -1.52
PDX1P52945 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.56□□□□□ -1.52
PDX1P52945 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 AC006539.1-201ENST00000481419 501 ntBASIC5.56□□□□□ -1.52
PDX1P52945 RPL38P3-201ENST00000484463 213 ntBASIC5.56□□□□□ -1.52
PDX1P52945 RN7SL547P-201ENST00000490793 290 ntBASIC5.56□□□□□ -1.52
PDX1P52945 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 AC006499.3-201ENST00000506077 748 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.56□□□□□ -1.52
PDX1P52945 TOMM22P4-201ENST00000511318 336 ntBASIC5.56□□□□□ -1.52
PDX1P52945 KCTD9P6-201ENST00000522306 950 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.56□□□□□ -1.52
PDX1P52945 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDX1P52945 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 SNRPGP1-201ENST00000553864 222 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AL049874.4-201ENST00000557593 255 ntBASIC5.56□□□□□ -1.52
PDX1P52945 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.56□□□□□ -1.52
PDX1P52945 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.56□□□□□ -1.52
PDX1P52945 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.56□□□□□ -1.52
PDX1P52945 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 AL021368.1-201ENST00000607490 540 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC012467.1-201ENST00000607740 256 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC004948.1-201ENST00000609858 672 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms