Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR7853-201ENST00000584820 132 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 OR7M1P-201ENST00000608946 533 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC28A1O00337 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SLC28A1O00337 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC28A1O00337 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC006206.1-201ENST00000544842 3387 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC28A1O00337 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 RNA5SP30-201ENST00000365552 115 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AL009179.1-201ENST00000406085 265 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 DPPA2P2-201ENST00000418220 897 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 PRUNEP1-201ENST00000425846 705 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC009784.1-201ENST00000426484 460 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 NDUFB4P8-201ENST00000435351 367 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC073465.2-201ENST00000440938 498 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AL161722.1-201ENST00000446972 1032 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC012123.2-201ENST00000485809 248 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC122718.2-201ENST00000505325 591 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 DUTP7-201ENST00000507982 486 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 RNA5SP438-201ENST00000516561 112 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 IGLV3-24-201ENST00000517477 197 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AP000648.1-201ENST00000529682 397 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC010487.1-201ENST00000594408 1172 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 RPL12P48-201ENST00000605620 304 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AL031601.1-201ENST00000605702 394 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AL162574.1-201ENST00000615702 950 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 MIR6806-201ENST00000622141 64 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 AC005005.4-201ENST00000623789 16698 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC28A1O00337 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 ADAM24P-201ENST00000398655 2101 ntBASIC5.41□□□□□ -1.54
SLC28A1O00337 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC28A1O00337 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC28A1O00337 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC28A1O00337 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC28A1O00337 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC28A1O00337 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC28A1O00337 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC28A1O00337 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC28A1O00337 AC104964.3-201ENST00000606115 2860 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC28A1O00337 RNA5SP273-201ENST00000362484 113 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 RN7SKP81-201ENST00000365603 331 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 GPS2P1-201ENST00000411761 986 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC28A1O00337 NENFP1-201ENST00000419476 466 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 HMGB1P32-201ENST00000425971 565 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AL022331.1-201ENST00000429025 477 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 RPL7P56-201ENST00000429441 717 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 UBE2V2P3-201ENST00000433562 437 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC28A1O00337 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms