Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 RNA5SP46-201ENST00000362370 120 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 MIR130A-201ENST00000385274 89 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AL121977.1-201ENST00000401636 979 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 Z84478.1-201ENST00000438230 1219 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AP000281.1-201ENST00000444036 316 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC005297.1-201ENST00000444765 862 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 FCF1P7-201ENST00000451185 558 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC087672.1-201ENST00000479876 766 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 TMEM97P2-201ENST00000517841 403 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AP003168.1-201ENST00000530091 307 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AL163952.1-202ENST00000569625 600 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC020978.7-201ENST00000575953 1187 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 BNIP3P7-201ENST00000605641 516 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AL354696.1-201ENST00000614652 497 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RNA5SP91-201ENST00000390902 119 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AL512422.1-201ENST00000407033 553 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 USP9YP19-201ENST00000412165 485 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC092651.1-201ENST00000426110 312 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 VN1R21P-201ENST00000426703 765 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 TAAR4P-201ENST00000454843 1039 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RN7SL174P-201ENST00000475578 289 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RN7SL717P-201ENST00000478343 297 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RPS3AP15-201ENST00000483874 781 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RWDD4P1-201ENST00000488019 565 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 RN7SL101P-201ENST00000496350 279 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC138866.2-201ENST00000508650 584 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC126615.2-201ENST00000553003 515 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 MIR4505-201ENST00000582238 73 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 AC073592.7-201ENST00000623659 507 ntBASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX9Q9Y5X1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 CR383656.5-201ENST00000547616 1340 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms